Isolation of nucleus from mammalian liver with iodixanol gradient solution

Isolation of nucleus from mammalian liver with iodixanol gradient solution

Reagents and equipment:
1. OptiPrepTM (600 g of iodixanol, ρ = 1.32 g/ml);
2. OptiPrepTM diluent (OD): 150mmol / L KCl, 30mmol / L MgCl2, 120mmol / L trimethylglycine - KOH, pH 7.8;
3. Homogenization medium (HM): 0.25 mol/L sucrose, 25 mmol/L KCl, 5 mmol/L MgCl2, 20 mmol/L trimethylglycine-KOH, pH 7.8; as required to OptiPrepTM diluent and homogenate medium Add protease inhibitor
4. High torque bridge motor (semiconductor switch control);
5. Potter-Elvehjem homogenizer, 20-40 ml, pores of about 0.07 mm;
6. High-speed centrifuge with a bucket rotor that can accommodate 15-50ml centrifuge tubes;
7. Syringe with metal trocar (inner diameter approx. 0.8mm);
8. Nylon filter;

experimental method:
All operations were carried out at 0-4 °C.
1. Prepare 500g/L iodixanol working solution: dip each 5-fold volume of OptiPrepTM with 1 volume of OptiPrepTM diluent;
2. Gradient solution: Diluted 500g/L iodixanol working solution with homogenizing medium (6 times volume + 4 volumes and 7 volumes + 3 volumes) to prepare two 300g / L and 350g / L An iodixanol gradient solution. Keep it on ice.
3. Remove the liver and cut into tiny pieces with scissors;
4. Transfer approximately half of the liver to a 20 ml homogenization medium of a Potter-Elvehjem homogenizer and grind it with a mortar for about 8 times and rotate at about 500 r/min to break the tissue;
5. Repeat the above for the other half of the liver chop;
6. Filter with a nylon filter;
7. Adjust the homogenate to 250 g / L iodixanol by mixing with an equal volume of 500 g / L iodixanol working solution;
8. Transfer 10-15 ml of the homogenate into a 50 ml tube, and add 10 ml each from 300 g/L and 350 g/L of iodixanol gradient solution to the homogenate;
9. Centrifuge at 100000g for 20min;
10. The nucleus is banded at the interface of 300g/L and 350g/L iodixanol, and the nuclei are aspirated by syringe and metal trocar;
11. Dilute the suspension with 2 volumes of homogenized medium and centrifuge the cells for 10 min at 2000 g to pellet the nuclei;

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